Second Science Symposium
January 18 - 21, 2005
Genotyping Phytophthora ramorum Isolates from U.S. Nurseries Using PCR-RFLP and Microsatellite Analyses
Rodrigo Olarte and Garbelotto, 151 Hilgard Hall, Dept.
of ESPM-ES, University of California, Berkeley, CA 94720; 510-643-4282(tel);
The risk of introducing the important plant pathogen Phytophthora ramorum outside of its present natural range is of extreme concern; however the detection of P. ramorum in U.S. nurseries is increasing. The USDA has confirmed the presence of P. ramorum in nurseries in twenty-one states that received plants from an infested southern California nursery. This nursery produces approximately 15 million landscape plants annually, of over 2200 varieties. Although it remains unknown whether these new introductions will lead to an outbreak of sudden oak death (SOD) in the affected states, many potential susceptible hosts of P. ramorum are widely distributed in forest ecosystems, and many of the affected states have climatic conditions conducive for SOD. As part of an effort to genotype new nursery infestations, we characterized nineteen of these isolates from thirteen states with cox I RFLP banding patterns (Kroon et al, 2004) and microsatellite analyses (Ivors et al, unpublished data). All isolates screened produced the typical ‘U.S.’ RFLP pattern and showed no variation among 14 microsatellite loci. These results indicate that all isolates analyzed consist of a single clone genotype, identical to isolates established in the wild in California and Oregon. This discovery is in contrast with findings from other nursery infestations in Oregon and Washington, where both the European and U.S. genotypes have been identified in infested blocks of plants.
| Coordinated by:
USDA Forest Service Pacific Southwest Research Station
University of California Integrated Hardwood Range Management Program,
Center for Forestry, Division of Agriculture and Natural Resources, and
California Oak Mortality Task Force
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